You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
541 lines
18 KiB
541 lines
18 KiB
// boost\math\distributions\beta.hpp |
|
|
|
// Copyright John Maddock 2006. |
|
// Copyright Paul A. Bristow 2006. |
|
|
|
// Use, modification and distribution are subject to the |
|
// Boost Software License, Version 1.0. |
|
// (See accompanying file LICENSE_1_0.txt |
|
// or copy at http://www.boost.org/LICENSE_1_0.txt) |
|
|
|
// http://en.wikipedia.org/wiki/Beta_distribution |
|
// http://www.itl.nist.gov/div898/handbook/eda/section3/eda366h.htm |
|
// http://mathworld.wolfram.com/BetaDistribution.html |
|
|
|
// The Beta Distribution is a continuous probability distribution. |
|
// The beta distribution is used to model events which are constrained to take place |
|
// within an interval defined by maxima and minima, |
|
// so is used extensively in PERT and other project management systems |
|
// to describe the time to completion. |
|
// The cdf of the beta distribution is used as a convenient way |
|
// of obtaining the sum over a set of binomial outcomes. |
|
// The beta distribution is also used in Bayesian statistics. |
|
|
|
#ifndef BOOST_MATH_DIST_BETA_HPP |
|
#define BOOST_MATH_DIST_BETA_HPP |
|
|
|
#include <boost/math/distributions/fwd.hpp> |
|
#include <boost/math/special_functions/beta.hpp> // for beta. |
|
#include <boost/math/distributions/complement.hpp> // complements. |
|
#include <boost/math/distributions/detail/common_error_handling.hpp> // error checks |
|
#include <boost/math/special_functions/fpclassify.hpp> // isnan. |
|
#include <boost/math/tools/roots.hpp> // for root finding. |
|
|
|
#if defined (BOOST_MSVC) |
|
# pragma warning(push) |
|
# pragma warning(disable: 4702) // unreachable code |
|
// in domain_error_imp in error_handling |
|
#endif |
|
|
|
#include <utility> |
|
|
|
namespace boost |
|
{ |
|
namespace math |
|
{ |
|
namespace beta_detail |
|
{ |
|
// Common error checking routines for beta distribution functions: |
|
template <class RealType, class Policy> |
|
inline bool check_alpha(const char* function, const RealType& alpha, RealType* result, const Policy& pol) |
|
{ |
|
if(!(boost::math::isfinite)(alpha) || (alpha <= 0)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"Alpha argument is %1%, but must be > 0 !", alpha, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_alpha |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_beta(const char* function, const RealType& beta, RealType* result, const Policy& pol) |
|
{ |
|
if(!(boost::math::isfinite)(beta) || (beta <= 0)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"Beta argument is %1%, but must be > 0 !", beta, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_beta |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_prob(const char* function, const RealType& p, RealType* result, const Policy& pol) |
|
{ |
|
if((p < 0) || (p > 1) || !(boost::math::isfinite)(p)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"Probability argument is %1%, but must be >= 0 and <= 1 !", p, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_prob |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_x(const char* function, const RealType& x, RealType* result, const Policy& pol) |
|
{ |
|
if(!(boost::math::isfinite)(x) || (x < 0) || (x > 1)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"x argument is %1%, but must be >= 0 and <= 1 !", x, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_x |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_dist(const char* function, const RealType& alpha, const RealType& beta, RealType* result, const Policy& pol) |
|
{ // Check both alpha and beta. |
|
return check_alpha(function, alpha, result, pol) |
|
&& check_beta(function, beta, result, pol); |
|
} // bool check_dist |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_dist_and_x(const char* function, const RealType& alpha, const RealType& beta, RealType x, RealType* result, const Policy& pol) |
|
{ |
|
return check_dist(function, alpha, beta, result, pol) |
|
&& beta_detail::check_x(function, x, result, pol); |
|
} // bool check_dist_and_x |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_dist_and_prob(const char* function, const RealType& alpha, const RealType& beta, RealType p, RealType* result, const Policy& pol) |
|
{ |
|
return check_dist(function, alpha, beta, result, pol) |
|
&& check_prob(function, p, result, pol); |
|
} // bool check_dist_and_prob |
|
|
|
template <class RealType, class Policy> |
|
inline bool check_mean(const char* function, const RealType& mean, RealType* result, const Policy& pol) |
|
{ |
|
if(!(boost::math::isfinite)(mean) || (mean <= 0)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"mean argument is %1%, but must be > 0 !", mean, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_mean |
|
template <class RealType, class Policy> |
|
inline bool check_variance(const char* function, const RealType& variance, RealType* result, const Policy& pol) |
|
{ |
|
if(!(boost::math::isfinite)(variance) || (variance <= 0)) |
|
{ |
|
*result = policies::raise_domain_error<RealType>( |
|
function, |
|
"variance argument is %1%, but must be > 0 !", variance, pol); |
|
return false; |
|
} |
|
return true; |
|
} // bool check_variance |
|
} // namespace beta_detail |
|
|
|
// typedef beta_distribution<double> beta; |
|
// is deliberately NOT included to avoid a name clash with the beta function. |
|
// Use beta_distribution<> mybeta(...) to construct type double. |
|
|
|
template <class RealType = double, class Policy = policies::policy<> > |
|
class beta_distribution |
|
{ |
|
public: |
|
typedef RealType value_type; |
|
typedef Policy policy_type; |
|
|
|
beta_distribution(RealType l_alpha = 1, RealType l_beta = 1) : m_alpha(l_alpha), m_beta(l_beta) |
|
{ |
|
RealType result; |
|
beta_detail::check_dist( |
|
"boost::math::beta_distribution<%1%>::beta_distribution", |
|
m_alpha, |
|
m_beta, |
|
&result, Policy()); |
|
} // beta_distribution constructor. |
|
// Accessor functions: |
|
RealType alpha() const |
|
{ |
|
return m_alpha; |
|
} |
|
RealType beta() const |
|
{ // . |
|
return m_beta; |
|
} |
|
|
|
// Estimation of the alpha & beta parameters. |
|
// http://en.wikipedia.org/wiki/Beta_distribution |
|
// gives formulae in section on parameter estimation. |
|
// Also NIST EDA page 3 & 4 give the same. |
|
// http://www.itl.nist.gov/div898/handbook/eda/section3/eda366h.htm |
|
// http://www.epi.ucdavis.edu/diagnostictests/betabuster.html |
|
|
|
static RealType find_alpha( |
|
RealType mean, // Expected value of mean. |
|
RealType variance) // Expected value of variance. |
|
{ |
|
static const char* function = "boost::math::beta_distribution<%1%>::find_alpha"; |
|
RealType result = 0; // of error checks. |
|
if(false == |
|
( |
|
beta_detail::check_mean(function, mean, &result, Policy()) |
|
&& beta_detail::check_variance(function, variance, &result, Policy()) |
|
) |
|
) |
|
{ |
|
return result; |
|
} |
|
return mean * (( (mean * (1 - mean)) / variance)- 1); |
|
} // RealType find_alpha |
|
|
|
static RealType find_beta( |
|
RealType mean, // Expected value of mean. |
|
RealType variance) // Expected value of variance. |
|
{ |
|
static const char* function = "boost::math::beta_distribution<%1%>::find_beta"; |
|
RealType result = 0; // of error checks. |
|
if(false == |
|
( |
|
beta_detail::check_mean(function, mean, &result, Policy()) |
|
&& |
|
beta_detail::check_variance(function, variance, &result, Policy()) |
|
) |
|
) |
|
{ |
|
return result; |
|
} |
|
return (1 - mean) * (((mean * (1 - mean)) /variance)-1); |
|
} // RealType find_beta |
|
|
|
// Estimate alpha & beta from either alpha or beta, and x and probability. |
|
// Uses for these parameter estimators are unclear. |
|
|
|
static RealType find_alpha( |
|
RealType beta, // from beta. |
|
RealType x, // x. |
|
RealType probability) // cdf |
|
{ |
|
static const char* function = "boost::math::beta_distribution<%1%>::find_alpha"; |
|
RealType result = 0; // of error checks. |
|
if(false == |
|
( |
|
beta_detail::check_prob(function, probability, &result, Policy()) |
|
&& |
|
beta_detail::check_beta(function, beta, &result, Policy()) |
|
&& |
|
beta_detail::check_x(function, x, &result, Policy()) |
|
) |
|
) |
|
{ |
|
return result; |
|
} |
|
return ibeta_inva(beta, x, probability, Policy()); |
|
} // RealType find_alpha(beta, a, probability) |
|
|
|
static RealType find_beta( |
|
// ibeta_invb(T b, T x, T p); (alpha, x, cdf,) |
|
RealType alpha, // alpha. |
|
RealType x, // probability x. |
|
RealType probability) // probability cdf. |
|
{ |
|
static const char* function = "boost::math::beta_distribution<%1%>::find_beta"; |
|
RealType result = 0; // of error checks. |
|
if(false == |
|
( |
|
beta_detail::check_prob(function, probability, &result, Policy()) |
|
&& |
|
beta_detail::check_alpha(function, alpha, &result, Policy()) |
|
&& |
|
beta_detail::check_x(function, x, &result, Policy()) |
|
) |
|
) |
|
{ |
|
return result; |
|
} |
|
return ibeta_invb(alpha, x, probability, Policy()); |
|
} // RealType find_beta(alpha, x, probability) |
|
|
|
private: |
|
RealType m_alpha; // Two parameters of the beta distribution. |
|
RealType m_beta; |
|
}; // template <class RealType, class Policy> class beta_distribution |
|
|
|
template <class RealType, class Policy> |
|
inline const std::pair<RealType, RealType> range(const beta_distribution<RealType, Policy>& /* dist */) |
|
{ // Range of permissible values for random variable x. |
|
using boost::math::tools::max_value; |
|
return std::pair<RealType, RealType>(static_cast<RealType>(0), static_cast<RealType>(1)); |
|
} |
|
|
|
template <class RealType, class Policy> |
|
inline const std::pair<RealType, RealType> support(const beta_distribution<RealType, Policy>& /* dist */) |
|
{ // Range of supported values for random variable x. |
|
// This is range where cdf rises from 0 to 1, and outside it, the pdf is zero. |
|
return std::pair<RealType, RealType>(static_cast<RealType>(0), static_cast<RealType>(1)); |
|
} |
|
|
|
template <class RealType, class Policy> |
|
inline RealType mean(const beta_distribution<RealType, Policy>& dist) |
|
{ // Mean of beta distribution = np. |
|
return dist.alpha() / (dist.alpha() + dist.beta()); |
|
} // mean |
|
|
|
template <class RealType, class Policy> |
|
inline RealType variance(const beta_distribution<RealType, Policy>& dist) |
|
{ // Variance of beta distribution = np(1-p). |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
return (a * b) / ((a + b ) * (a + b) * (a + b + 1)); |
|
} // variance |
|
|
|
template <class RealType, class Policy> |
|
inline RealType mode(const beta_distribution<RealType, Policy>& dist) |
|
{ |
|
static const char* function = "boost::math::mode(beta_distribution<%1%> const&)"; |
|
|
|
RealType result; |
|
if ((dist.alpha() <= 1)) |
|
{ |
|
result = policies::raise_domain_error<RealType>( |
|
function, |
|
"mode undefined for alpha = %1%, must be > 1!", dist.alpha(), Policy()); |
|
return result; |
|
} |
|
|
|
if ((dist.beta() <= 1)) |
|
{ |
|
result = policies::raise_domain_error<RealType>( |
|
function, |
|
"mode undefined for beta = %1%, must be > 1!", dist.beta(), Policy()); |
|
return result; |
|
} |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
return (a-1) / (a + b - 2); |
|
} // mode |
|
|
|
//template <class RealType, class Policy> |
|
//inline RealType median(const beta_distribution<RealType, Policy>& dist) |
|
//{ // Median of beta distribution is not defined. |
|
// return tools::domain_error<RealType>(function, "Median is not implemented, result is %1%!", std::numeric_limits<RealType>::quiet_NaN()); |
|
//} // median |
|
|
|
//But WILL be provided by the derived accessor as quantile(0.5). |
|
|
|
template <class RealType, class Policy> |
|
inline RealType skewness(const beta_distribution<RealType, Policy>& dist) |
|
{ |
|
BOOST_MATH_STD_USING // ADL of std functions. |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
return (2 * (b-a) * sqrt(a + b + 1)) / ((a + b + 2) * sqrt(a * b)); |
|
} // skewness |
|
|
|
template <class RealType, class Policy> |
|
inline RealType kurtosis_excess(const beta_distribution<RealType, Policy>& dist) |
|
{ |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
RealType a_2 = a * a; |
|
RealType n = 6 * (a_2 * a - a_2 * (2 * b - 1) + b * b * (b + 1) - 2 * a * b * (b + 2)); |
|
RealType d = a * b * (a + b + 2) * (a + b + 3); |
|
return n / d; |
|
} // kurtosis_excess |
|
|
|
template <class RealType, class Policy> |
|
inline RealType kurtosis(const beta_distribution<RealType, Policy>& dist) |
|
{ |
|
return 3 + kurtosis_excess(dist); |
|
} // kurtosis |
|
|
|
template <class RealType, class Policy> |
|
inline RealType pdf(const beta_distribution<RealType, Policy>& dist, const RealType& x) |
|
{ // Probability Density/Mass Function. |
|
BOOST_FPU_EXCEPTION_GUARD |
|
|
|
static const char* function = "boost::math::pdf(beta_distribution<%1%> const&, %1%)"; |
|
|
|
BOOST_MATH_STD_USING // for ADL of std functions |
|
|
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
|
|
// Argument checks: |
|
RealType result = 0; |
|
if(false == beta_detail::check_dist_and_x( |
|
function, |
|
a, b, x, |
|
&result, Policy())) |
|
{ |
|
return result; |
|
} |
|
using boost::math::beta; |
|
return ibeta_derivative(a, b, x, Policy()); |
|
} // pdf |
|
|
|
template <class RealType, class Policy> |
|
inline RealType cdf(const beta_distribution<RealType, Policy>& dist, const RealType& x) |
|
{ // Cumulative Distribution Function beta. |
|
BOOST_MATH_STD_USING // for ADL of std functions |
|
|
|
static const char* function = "boost::math::cdf(beta_distribution<%1%> const&, %1%)"; |
|
|
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
|
|
// Argument checks: |
|
RealType result = 0; |
|
if(false == beta_detail::check_dist_and_x( |
|
function, |
|
a, b, x, |
|
&result, Policy())) |
|
{ |
|
return result; |
|
} |
|
// Special cases: |
|
if (x == 0) |
|
{ |
|
return 0; |
|
} |
|
else if (x == 1) |
|
{ |
|
return 1; |
|
} |
|
return ibeta(a, b, x, Policy()); |
|
} // beta cdf |
|
|
|
template <class RealType, class Policy> |
|
inline RealType cdf(const complemented2_type<beta_distribution<RealType, Policy>, RealType>& c) |
|
{ // Complemented Cumulative Distribution Function beta. |
|
|
|
BOOST_MATH_STD_USING // for ADL of std functions |
|
|
|
static const char* function = "boost::math::cdf(beta_distribution<%1%> const&, %1%)"; |
|
|
|
RealType const& x = c.param; |
|
beta_distribution<RealType, Policy> const& dist = c.dist; |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
|
|
// Argument checks: |
|
RealType result = 0; |
|
if(false == beta_detail::check_dist_and_x( |
|
function, |
|
a, b, x, |
|
&result, Policy())) |
|
{ |
|
return result; |
|
} |
|
if (x == 0) |
|
{ |
|
return 1; |
|
} |
|
else if (x == 1) |
|
{ |
|
return 0; |
|
} |
|
// Calculate cdf beta using the incomplete beta function. |
|
// Use of ibeta here prevents cancellation errors in calculating |
|
// 1 - x if x is very small, perhaps smaller than machine epsilon. |
|
return ibetac(a, b, x, Policy()); |
|
} // beta cdf |
|
|
|
template <class RealType, class Policy> |
|
inline RealType quantile(const beta_distribution<RealType, Policy>& dist, const RealType& p) |
|
{ // Quantile or Percent Point beta function or |
|
// Inverse Cumulative probability distribution function CDF. |
|
// Return x (0 <= x <= 1), |
|
// for a given probability p (0 <= p <= 1). |
|
// These functions take a probability as an argument |
|
// and return a value such that the probability that a random variable x |
|
// will be less than or equal to that value |
|
// is whatever probability you supplied as an argument. |
|
|
|
static const char* function = "boost::math::quantile(beta_distribution<%1%> const&, %1%)"; |
|
|
|
RealType result = 0; // of argument checks: |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
if(false == beta_detail::check_dist_and_prob( |
|
function, |
|
a, b, p, |
|
&result, Policy())) |
|
{ |
|
return result; |
|
} |
|
// Special cases: |
|
if (p == 0) |
|
{ |
|
return 0; |
|
} |
|
if (p == 1) |
|
{ |
|
return 1; |
|
} |
|
return ibeta_inv(a, b, p, static_cast<RealType*>(0), Policy()); |
|
} // quantile |
|
|
|
template <class RealType, class Policy> |
|
inline RealType quantile(const complemented2_type<beta_distribution<RealType, Policy>, RealType>& c) |
|
{ // Complement Quantile or Percent Point beta function . |
|
// Return the number of expected x for a given |
|
// complement of the probability q. |
|
|
|
static const char* function = "boost::math::quantile(beta_distribution<%1%> const&, %1%)"; |
|
|
|
// |
|
// Error checks: |
|
RealType q = c.param; |
|
const beta_distribution<RealType, Policy>& dist = c.dist; |
|
RealType result = 0; |
|
RealType a = dist.alpha(); |
|
RealType b = dist.beta(); |
|
if(false == beta_detail::check_dist_and_prob( |
|
function, |
|
a, |
|
b, |
|
q, |
|
&result, Policy())) |
|
{ |
|
return result; |
|
} |
|
// Special cases: |
|
if(q == 1) |
|
{ |
|
return 0; |
|
} |
|
if(q == 0) |
|
{ |
|
return 1; |
|
} |
|
|
|
return ibetac_inv(a, b, q, static_cast<RealType*>(0), Policy()); |
|
} // Quantile Complement |
|
|
|
} // namespace math |
|
} // namespace boost |
|
|
|
// This include must be at the end, *after* the accessors |
|
// for this distribution have been defined, in order to |
|
// keep compilers that support two-phase lookup happy. |
|
#include <boost/math/distributions/detail/derived_accessors.hpp> |
|
|
|
#if defined (BOOST_MSVC) |
|
# pragma warning(pop) |
|
#endif |
|
|
|
#endif // BOOST_MATH_DIST_BETA_HPP |
|
|
|
|
|
|